Search details
1.
Digital measurement of SARS-CoV-2 transmission risk from 7 million contacts.
Nature
; 626(7997): 145-150, 2024 Feb.
Article
in English
| MEDLINE | ID: mdl-38122820
2.
The epidemiological impact of the NHS COVID-19 app.
Nature
; 594(7863): 408-412, 2021 06.
Article
in English
| MEDLINE | ID: mdl-33979832
3.
Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1.
J Antimicrob Chemother
; 78(3): 656-664, 2023 03 02.
Article
in English
| MEDLINE | ID: mdl-36738248
4.
OpenABM-Covid19-An agent-based model for non-pharmaceutical interventions against COVID-19 including contact tracing.
PLoS Comput Biol
; 17(7): e1009146, 2021 07.
Article
in English
| MEDLINE | ID: mdl-34252083
5.
Estimating SARS-CoV-2 variant fitness and the impact of interventions in England using statistical and geo-spatial agent-based models.
Philos Trans A Math Phys Eng Sci
; 380(2233): 20210304, 2022 Oct 03.
Article
in English
| MEDLINE | ID: mdl-35965459
6.
Evaluation of Phylogenetic Methods for Inferring the Direction of Human Immunodeficiency Virus (HIV) Transmission: HIV Prevention Trials Network (HPTN) 052.
Clin Infect Dis
; 72(1): 30-37, 2021 01 23.
Article
in English
| MEDLINE | ID: mdl-31922537
7.
A Comprehensive Genomics Solution for HIV Surveillance and Clinical Monitoring in Low-Income Settings.
J Clin Microbiol
; 58(10)2020 09 22.
Article
in English
| MEDLINE | ID: mdl-32669382
8.
Correction: Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe.
PLoS Biol
; 15(7): e1002608, 2017 Jul.
Article
in English
| MEDLINE | ID: mdl-28704367
9.
Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe.
PLoS Biol
; 15(6): e2001855, 2017 Jun.
Article
in English
| MEDLINE | ID: mdl-28604782
10.
PHYLOSCANNER: Inferring Transmission from Within- and Between-Host Pathogen Genetic Diversity.
Mol Biol Evol
; 35(3): 719-733, 2018 Mar 01.
Article
in English
| MEDLINE | ID: mdl-29186559
11.
Protein structural robustness to mutations: an in silico investigation.
Phys Chem Chem Phys
; 18(20): 13770-80, 2016 05 18.
Article
in English
| MEDLINE | ID: mdl-26688116
12.
Epidemiological impacts of the NHS COVID-19 app in England and Wales throughout its first year.
Nat Commun
; 14(1): 858, 2023 02 22.
Article
in English
| MEDLINE | ID: mdl-36813770
13.
Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load.
Virus Evol
; 8(1): veac022, 2022.
Article
in English
| MEDLINE | ID: mdl-35402002
14.
A highly virulent variant of HIV-1 circulating in the Netherlands.
Science
; 375(6580): 540-545, 2022 02 04.
Article
in English
| MEDLINE | ID: mdl-35113714
15.
Epidemiological changes on the Isle of Wight after the launch of the NHS Test and Trace programme: a preliminary analysis.
Lancet Digit Health
; 2(12): e658-e666, 2020 12.
Article
in English
| MEDLINE | ID: mdl-33078140
16.
Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing.
Science
; 368(6491)2020 05 08.
Article
in English
| MEDLINE | ID: mdl-32234805
17.
Quantifying HIV transmission flow between high-prevalence hotspots and surrounding communities: a population-based study in Rakai, Uganda.
Lancet HIV
; 7(3): e173-e183, 2020 03.
Article
in English
| MEDLINE | ID: mdl-31953184
18.
Link between the numbers of particles and variants founding new HIV-1 infections depends on the timing of transmission.
Virus Evol
; 5(1): vey038, 2019 Jan.
Article
in English
| MEDLINE | ID: mdl-30723550
19.
Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis.
Nat Commun
; 10(1): 1411, 2019 03 29.
Article
in English
| MEDLINE | ID: mdl-30926780
20.
Workup of Human Blood Samples for Deep Sequencing of HIV-1 Genomes.
Methods Mol Biol
; 1746: 55-61, 2018.
Article
in English
| MEDLINE | ID: mdl-29492886